draw_TrajClusterGrid.Rd
Group all DDEGs based on their sub-type trajectory patterns and plot their trajectories together, then layout all sub-type trajectory patterns which contains more than N genes in a grid plot. Each individual sub-grid plot is titled with sub-type trajectory pattern and number of genes included. X-axis is the time, Y-aixs is log2 transformed fitted count trajectory.
draw_TrajClusterGrid(
master.list,
min.traj.n = 10,
save.as.PDF = NA,
pdf.width = 10,
pdf.height = 10
)
a list object. The output from run_TrendCatcher function, contains master.table element.
an integer variable. The minimum number of genes from the same sub-type trajectory. By default if 10.
a string. The absolute file path to save the figure as PDF file if needed. If set to NA, will print the figure instead of saving it as PDF file.
a numeric variable. The PDF file width size. By default is 10.
a numeric variable. The PDF file height size. By default is 10.